|
MCS Preprints
(numbered 1000-1499) |
|
The following preprints are listed in numerical order. For more
information, please contact Judy Beumer at beumer@mcs.anl.gov.
| 1000 |
1100 | 1200 | 1300 | 1400
|
|
| 1000-1099 |
|
|
|
| P1001.pdf |
C. Liu, L. YANG, I. Foster, D. Angulo, "Design and Evaluation of a Resource Selection Framework for
Grid Applications," Proc. Int'l Symp. on High-Performance Distributed
Computing (HPDC-11), Edinburgh, July 2002. Also Preprint ANL/MCS-P1001-1002,
October 2002. |
|
|
| P1002.pdf |
M. Anitescu and G. D. Hart, "A
Constraint Stabilized Time-Stepping Approach for Multibody Dynamics with
Contact and Small Friction," Int. J. Numer. Meth. Engng 60
(2004), pp. 2335-2371. Also Preprint ANL/MCS-P1002-1002, October
2002. |
|
|
| P1004.pdf |
G. X. Yu and E. Marland,
"Establishment of a Knowledge Base for Function Annotations in
High-Throughput Sequence Analysis," Preprint ANL/MCS-P1004-1002,
October 2002. |
|
|
| P1007.pdf |
R. Thakur and W. Gropp,
"Improving the Performance of MPI Collective Communication on
Switched Networks," Preprint ANL/MCS-P1007-1102, November 2002. |
|
|
| P1008.pdf |
J. M. Restrepo and G. K. Leaf,
"Noise Effects on Wave-Generated Transport Induced by Ideal
Waves," J. Physical Oceanography 32 (2002), pp.
2334-2349. Also Preprint ANL/MCS-P1008-0102, Jan. 2002. |
|
|
| P1009.pdf |
K. Amin, S. Nijsure, and G. von
Laszewski, "Open Collaborative Grid Service Architecture (OCGSA),"
Preprint ANL/MCS-P1009-1102, Nov. 2002. |
|
|
| P1010.pdf |
M. Vilayannur, R. B. Ross, P. H.
Carns, R. Thakur, A. Sivasubramaniam, and M. Kandemir, "Improving the
Performance of the POSIX I/O Interface to PVFS," Preprint ANL/MCS-P1010-1102,
Nov. 2002. |
|
|
| P1011.pdf |
J. N. Lyness and G. Monegato,
"Asymptotic Expansions for Two-Dimensional Hypersingular
Integrals," Preprint ANL/MCS-P1011-1102, November 2002. |
| |
|
|
P1012.pdf |
J. N. Lyness and T. Sorevik,
"Four-Dimensional Lattice Rules Generated by Skew-Circulant Matrices,"
Preprint ANL/MCS-P1012-0702, July 2002. |
| |
|
| P1013.pdf |
J. N. Lyness, "Notes on
Lattice Rules," Journal of Complexity (to appear). Also
Preprint ANL/MCS-P1013-1102, November 2002. |
|
|
| P1014.pdf |
L. Wos, "Double-Negation
Elimination in Some Propositional Logics," Studia Logica (to
appear). Also Preprint ANL/MCS-P1014-1202, December 2002. |
|
|
| P1015.pdf |
M. P. Friedlander and M. A.
Saunders, "A Globally Convergent Linearly Constrained Lagrangian
Method for Nonlinear Optimization," SIAM J. Optimization 15(3)
(2005), pp. 863-897. Also Preprint ANL/MCS-P1015-1202,
December 2002. |
|
|
| P1016.pdf |
G. von Laszewski, J. Gawor, S.
Krishnan, and K. Jackson, "Commodity Grid Kits - Middleware for
Building Grid Computing Environments," Preprint ANL/MCS-P1016-0103,
January 2003. |
|
|
| P1017.pdf |
J. J. Evans, S. Baik, C. S. Hood,
W. Gropp, "Toward Understanding Soft Faults in High Performance
Cluster Networks," Preprint ANL/MCS-P1017-0103, Jan. 2003. |
| |
|
|
P1020.pdf |
U. Naumann, "Statement-Level
Optimality of Tangent-Linear and Adjoint Models," Preprint ANL/MCS-P1020-0103,
January 2003. |
| |
|
| P1022.pdf |
U. Naumann and P. Heimbach,
"Coupling Tangent-Linear and Adjoint Models," Preprint ANL/MCS-P1022-0203,
June 2003. |
|
|
| P1023.pdf |
M. Anitescu, A. Miller, G. D. Hart,
"Constraint Stabilization for Time-Stepping Approaches for Rigid
Multibody Dynamics with Joints, Contact, and Friction, Proc. DETC'03 (to
appear). Also Preprint ANL/MCS-P1023-0403, April 2003. |
|
|
| P1024.pdf |
V. Welch, F. Siebenlist, I. Foster,
J. Bresnahan, K. Czajkowski, J. Gawor, C. Kesselman, S. Meder, L. Pearlman,
S. Tuecke, "Security for Grid Services," Preprint ANL/MCS-P1024-0203,
February 2003. |
|
|
| P1026.pdf |
S. Leyffer, "Mathematical
Programs with Complementarity Constraints," Preprint ANL/MCS-P1026-0203,
February 2003. |
|
|
| P1027.pdf |
S. Bhowmick, L. McInnes, B. Norris,
P. Raghavan, "The Role of Multimethod Linear Solvers in PDE-Based
Simulations," Preprint ANL/MCS-P1027-0203, Feburary 2003. |
|
|
| P1028.pdf |
P. Hovland, K. Keahey, L. C.
McInnes, B. Norris, L. Freitag, P. Raghavan, "A Quality-of-Service
Architecture for High-Performance Numerical Components," Preprint ANL/MCS-P1028-0203,
February 2003. |
|
|
| P1029.pdf |
A. Rodriguez, D. Sulakhe, E.
Marland, V. Nefedova, G. X. Yu, and N. Maltsev, "GADU - Genome
Analysis and Database Update Pipeline," Preprint ANL/MCS-P1029-0203,
February 2003. |
|
|
| P1030.pdf |
N. T. Karonis, M. E. Papka, J.
Binns, J. Bresnahan, J. A. Insley, D. Jones, J. M. Link,
"High-Resolution Remote Rendering of Large Datasets in a
Collaborative Environment," Future Generation Computer Systems 19
(2003), 909-917. Also Preprint ANL/MCS-P1030-0203, February
2003. |
|
|
| P1032.pdf |
U. Naumann and P. Gottschling,
"Simulated Annealing for Optimal Pivot Selection in Jacobian
Accumulation," to appear in Proceedings of Second Symp. on
Stochastic Algorithms, Foundation and Applications, Hatfield, UK, Springer
(LNCS). Also Preprint ANL/MCS-P1032-0303, March 2003. |
|
|
| P1033.pdf |
S. Vazhkudai and J. M. Schopf,
"Using Regression Techniques to Predict Large Data Transfers,"
The International Journal of High Performance Computing Applications (IJHPCA),
special issue on Grid Computing: Infrastructure and Applications, vol. 17,
No. 3, August 2003. Also Preprint ANL/MCS-P1033-0303, March 2003. |
|
|
| P1034.pdf |
M. Anitescu, "A Fixed
Time-Step Approach for Multibody Dynamics with Contact and Friction,"
Preprint ANL/MCS-P1034-0303, March 2003. |
|
|
| P1035.pdf |
W. Allcock, J. Bresnahan, J. Bunn, S. Hedge, J. Insley, R.
Kettimuthu, H. Newman, S. Ravot, T. Rimovsky, C. Steenberg, L. Winkler,
"Grid-Enables Particle Physics Event Analysis: Experiences Using a 10
Gb, High-Latency Network for a High-Energy Physics Application," Future
Generation Computer Systems 19(6) (2003), pp. 983-997.
Also Preprint ANL/MCS-P1035-0303, March 2003. |
|
|
| P1036.pdf |
A. Grimshaw and S. Tuecke,
"Grid Services Extend Web Services," Web Services Journal
(to appear. Aug. 2003). Also Preprint ANL/MCS-P1036-0303, March
2003. |
|
|
| P1037.pdf |
L. A. Freitag and R. M. Loy,
"Theoretical Cost Comparison of Remote Visualization
Strategies," Preprint ANL/MCS-P1037-0303, March 2003. |
|
|
| P1038.pdf |
R. Thakur and W. Gropp,
"Improving the Performance of Collective Operations in MPICH,"
Preprint ANL/MCS-P1038-0403, April 2003. |
|
|
| P1039.pdf |
O. S. Matlin and W. McCune,
"Encapsulation for Practical Simplification Procedures,"
Preprint ANL/MCS-P1039-0403, April 2003. |
|
|
| P1040.pdf |
X. Zhang, J. Freschl, and J. M.
Schopf, "A Performance Study of Monitoring and Information Services
for Distributed Systems," Preprint ANL/MCS-P1040-0403, April 2003. |
|
|
| P1041.pdf |
I. Lee, P. Raghavan, S. Schofield,
and P. Fischer, "An O(n log n) Solution
Algorithm for Spectral Element Methods," Preprint ANL/MCS-P1041-0403,
April 2003. |
|
|
| P1042.pdf |
L. Pearlman, V. Welch, I. Foster,
C. Kesselman, and S. Tuecke, "A Community Authorization Service for
Group Collaboration," Preprint ANL/MCS-P1042-0502, May 2002. |
|
|
| P1045.pdf |
S. Byna, W. Gropp, X.-H. Sun, R.
Thakur, "Improving the Performance of MPI Derived Datatypes by
Optimizing Memory-Access Cost," Preprint ANL/MCS-P1045-0403, April
2003. |
|
|
| P1046.pdf |
S. Anand, S. Yoginath, G. von
Laszewski, B. Alunkal, X.-H. Sun, "Flow-based Multistage
Co-allocation Service," Preprint ANL/MCS-P1046.0403, April 2003. |
|
|
| P1047.pdf |
G. von Laszewski, B. Alunkal, J.
Gawor, R. Madduri, P. Plaszczak, Xian-He Sun, "A File Transfer
Component for Grids," Preprint ANL/MCS-P1047-0403, April 2003. |
|
|
| P1048.pdf |
J. Li, W.-K. Liao, A. Choudhary, R.
Ross, R. Thakur, W. Gropp, R. Latham, "Parallel netCDF: A Scientific
High-Performance I/O Interface," Preprint ANL/MCS-P1048-0503, May
2003. |
|
|
| P1049.pdf |
M. Grimsditch, G. K. Leaf, H. G.
Kaper, D. A. Karpeev, R. E. Camley, "Normal Modes of Spin Exictations
in Magnetic Nano-Particles," Preprint ANL/MCS-P1049-0503, May 2003. |
|
|
| P1050.pdf |
A. Zagaris, H. G. Kaper, T. J.
Kaper, "Analysis of the Computational Singular Perturbation Reduction Method for Chemical
Kinetics," J. of Nonlinear Sci. 14(1) (Jan./Feb. 2004),
pp. 59-91. Also Preprint ANL/MCS-P1050-0503, May 2003. |
|
|
| P1052.pdf |
J. W. Lottes and P. F. Fischer,
"Hybrid Multigrid/Schwarz Algorithms for the Spectral Element
Method," J. Sci. Comput. 24 (2005), pp. 45-78.
Also Preprint ANL/MCS-P1052-0403, April 2003. |
|
|
| P1053.pdf |
K. Keahey, V. Welch, S. Lang, B.
Liu, S. Meder, "Fine-Grain Authorization Policies in the GRID: Design
and Implementation," Concurrency Comput.: Pract. Exper. 16
(2004), pp. 477-488. Also Preprint ANL/MCS-P1053-0603, June 2003. |
| |
|
|
P1054.pdf |
S. Leyffer, "Complementarity
Constraints as Nonlinear Equations: Theory and Numerical Experience,"
Preprint ANL/MCS-P1054-0603, June 2003. |
| |
|
| P1055.pdf |
S. J. Benson and T. S. Munson,
"Flexible Complementarity Solvers for Large-Scale Applications,"
Optimization Methods and Software 21, no. 1 (2006), pp.
155-168. Also Preprint ANL/MCS-P1055-0603, June 2003. |
|
|
| P1056.pdf |
L. Pearlman, C. Kesselman, V.
Welch, I. Foster, S. Tuecke, "The Community Authorization Service:
Status and Future," Preprint ANL/MCS-P1056-0603, June 2003. |
|
|
| P1057.pdf |
M. R. Paul, K.-H. Chiam, M. C.
Cross, P. F. Fischer, and H. S. Greenside, "Pattern Formation and
Dynamics in Rayleigh-Bénard Convection: Numerical Simulations of
Experimentally Realistic Geometries," Preprint ANL/MCS-P1057-0603,
June 2003. |
|
|
| P1058.pdf |
O. F. Rana, A. Shaikhali, and G.
von Laszewski, "Creating and Managing Grid Services," in Grid
Computing: A Practical Guide to Technology and Applications, ed. Ahmar
Abbas, Charles River Media, 2003. Also Preprint ANL/MCS-P1058-0603,
June 2003. |
|
|
| P1064.pdf |
R. Stevens, M. E. Papka, and T.
Disz, "The Access Grid: Prototyping - Workspaces of the Future,"
Preprint ANL/MCS-P1064-0603, June 2003. |
|
|
| P1065.pdf |
S. Newhouse, J. MacLaren, and K.
Keahey, "Trading Grid Services within the UK e-Science Grid," in
Grid Resource Management, edited by J. Nabrzyski, J. M. Schopf, and
J. Weglarz, Kluwer Academic Publishers, chapter 29, 2003. Also
Preprint ANL/MCS-P1065-0603, June 2003. |
|
|
| P1066.pdf |
U. Naumann, "Statement-Level
Optimality of Tangent-Linear and Adjoint Models," Preprint ANL/MCS-P1066-0603,
June 2003. |
|
|
| P1068.pdf |
R. Ross, N. Miller, and W. Gropp,
"Implementing Fast and Resuable Datatype Processing," Proc.
EuroPVM/MPI 2003, Venice, Sept. 2003. Also Preprint ANL/MCS-P1068-0603, July 2003. |
|
|
| P1069.pdf |
L. Yang, J. M. Schopf, and I.
Foster, "Conservative Scheduling: Using Predicted Variance to Improve
Scheduling Decisions in Dynamic Environments," Preprint ANL/MCS-P1069-0703,
July 2003. |
|
|
| P1071.pdf |
J. J. Evans, C. S. Hood, W. D. Gropp, "Exploring the Relationship
Between Parallel Application Run-Time Variability and Network Performance in
Clusters," Preprint ANL/MCS-P1071-0703,
July 2003. |
|
|
| P1072.pdf |
M. Hereld, "Local Methods for
Measuring Tiled Display Alignment," Preprint ANL/MCS-P1072-0803,
August 2003. |
|
|
| P1073.pdf |
U. Naumann and J. Utke,
"Reduction of Edge Labeled DAGs through Constant Folding,"
Preprint ANL/MCS-P1073-0803, September 2003. |
|
|
| P1074.pdf |
Y. Zhou, "Eigenvalue
Computation from the Optimization Perspective: On Jacobi-Davidson, IIGD,
RQI, and Newton Updates," Preprint ANL/MCS-P1074-0803, August 2003. |
|
|
| P1075.pdf |
I. Foster and C. Kesselman,
"The Grid in a Nutshell," in Grid
Resource Management, eds. J. Nabrzyski, J. M. Schopf, and J. Weglarz, Kluwer Academic, Chap. 1
(to appear). Preprint ANL/MCS-P1075-0803, August 2003. |
|
|
| P1076.pdf |
J. M. Schopf, "Ten Actions
When Grid Scheduling," in Grid
Resource Management, eds. J. Nabrzyski, J. M. Schopf, and J. Weglarz, Kluwer Academic, Chap.
2 (to appear). Also Preprint ANL/MCS-P1076-0803, August 2003. |
|
|
| P1077.pdf |
H. Dail, O. Sievert, F. Berman, H.
Casanova, A. YarKhan, S. Vadhiyar, J. Dongarra, C. Liu, L. Yang, D. Angulo,
and I. Foster, "Scheduling in the Grid Application Development
Software Project," in Grid
Resource Management, eds. J. Nabrzyski, J. M. Schopf, and J. Weglarz, Kluwer Academic, Chap.
6 (to appear). Also Preprint ANL/MCS-P1077-0803, August 2003. |
|
|
| P1078.pdf |
K. Czajkowski, I. Foster, C.
Kesselman, and S. Tuecke, "Grid Service Level Agreements,"
in Grid
Resource Management, eds. J. Nabrzyski, J. M. Schopf, and J. Weglarz, Kluwer Academic, Chap.
8 (to appear). Also Preprint ANL/MCS-P1078-0803, August 2003. |
|
|
| P1079.pdf |
B. Nitzberg, J. M. Schopf, and J.
P. Jones, "PBS Pro: Grid Computing and Scheduling
Attributes," in Grid
Resource Management, eds. J. Nabrzyski, J. M. Schopf, and J. Weglarz, Kluwer Academic, Chap.
13 (to appear). Also Preprint ANL/MCS-P1079-0803, August 2003. |
|
|
| P1080.pdf |
J. M. Schopf and L. Yang,
"Using Predicted Variance for Conservative Scheduling on Shared
Resources," in Grid
Resource Management, eds. J. Nabrzyski, J. M. Schopf, and J. Weglarz, Kluwer Academic, Chap.
15 (to appear). Also Preprint ANL/MCS-P1080-0803, August 2003. |
|
|
| P1081.pdf |
K. Ranganathan and I. Foster,
"Computation Scheduling and Data Replication Algorithms for Data
Grids," in Grid
Resource Management, eds. J. Nabrzyski, J. M. Schopf, and J. Weglarz, Kluwer Academic, Chap.
22
(to appear). Also Preprint ANL/MCS-P1082-0803, August 2003. |
|
|
| P1082.pdf |
A. Iamnitchi and I. Foster, "A
Peer-to-Peer Approach to Resource Location in Grid
Environments," in Grid Resource Management, eds.
J. Nabrzyski, J. M. Schopf, and J. Weglarz, Kluwer Academic, Chap. 25 (to appear).
Also Preprint ANL/MCS-P1082-0803, August 2003. |
|
|
| P1083.pdf |
G. G. Maisuradze, D. L. Thompson,
A. F. Wagner, and M. Minkoff, "Interpolating Moving Least Squares
Methods for Fitting Potential Energy Surfaces: Detailed Analysis of
One-Dimensional Applications," J. Chem. Phys. 119(19)
(Nov. 15, 2003), pp. 10002-10014. Also Preprint ANL/MCS-P1083-0803, August
2003. |
|
|
| P1084.pdf |
S. Benson, M. Krishnan, L. McInnes,
J. Nieplocha, J. Sarich, "Using the GA and TAO Toolkits for Solving
Large-Scale Optimization Problems on Parallel Computers," Preprint
ANL/MCS-P1084-0903, September 2003. |
|
|
| P1085.pdf |
A. Ching, A. Choudhary, K. Coloma,
W.-K. Liao, R. Ross, and W. Gropp, "Noncontiguous I/O Accesses
Through MPI-IO," Preprint ANL/MCS-P1085-0903, September 2003. |
|
|
| P1087.pdf |
W. McCune, R. Padmanabhan, M. A.
Rose, and R. Veroff, "Short Equational Bases for Ortholattices,"
Preprint ANL/MCS-P1087-0903, September 2003. |
|
|
| P1088.pdf |
B.-D. Lee and J. M. Schopf,
"Run-Time Prediction of Parallel Applications on Shared
Environment," Preprint ANL/MCS-P1088-0903, September 2003. |
|
|
| P1089.pdf |
N. Desai, A. Lusk, R. Bradshaw, R.
Evard, "BCFG: A Configuration Management Tool for Heterogeneous
Environments," Preprint ANL/MCS-P1089-0903, Sept. 2003. |
|
|
| P1090.pdf |
U. Naumann and J. Riehme, "A
Differentiation-Enabled Fortran 95 Compiler," ACM Trans. Math.
Software 31(4) (2005), pp. 458-474. Also Preprint ANL/MCS-P1090-0903,
Sept. 2003. |
|
|
| P1091.pdf |
S. Leyffer, "The Penalty
Interior-Point Method Fails to Converge," Preprint ANL/MCS-P1091-0903,
September 2003. |
|
|
| P1092.pdf |
R. Padmanabhan and W. McCune,
"Tarski Theorems on Self-Dual Equational Bases for Groups,"
Preprint ANL/MCS-P1092-0903, August 2004. |
|
|
| P1093.pdf |
M. Anitescu, W. J. Layton, F.
Pahlevani, "Unconditional Stability for Numerical Scheme Combining
Implicit Timestepping for Local Effects and Explicit Timestepping for
Nonlocal Effects," Preprint ANL/MCS-P1093-0903, September 2003. |
|
|
| P1094.pdf |
K. Keahey, V. Welch, S. Lang, B.
Liu, and S. Meder, "Fine-Grained Authorization for Job Execution in
the Grid: Design and Implementation," Preprint ANL/MCS-P1094-0903,
September 2003. |
|
|
| P1095.pdf |
M. R. Thompson, A. Essiari, K.
Keahey, V. Welch, S. Lang, and B. Liu, "Fine-Grained Authorization
for Job and Resource Management Using Akenti and the Globus Toolkit,"
Preprint ANL/MCS-P1095-0903, September 2003. |
|
|
| P1096.pdf |
K. Keahey, M. Ripeanu, and K.
Doering, "Dynamic Creation and Management of Runtime Environments in
the Grid," Preprint ANL/MCS-P1096-0903, September 2003. |
|
|
| P1098.pdf |
G. von Laszewski, K. Amin, M.
Hategan, N. J. Zaluzec, S. Hampton, A. Rossi, "GridAnt: A
Client-Controllable Grid Workflow System," Preprint ANL/MCS-P1098-1003,
October 2003. |
|
|
| P1099.pdf |
G. D. Hart and M. Anitescu, "A
Hard-Constraint Time-Stepping Approach for Rigid Multibody Dynamics with
Joints, Contact, and Friction," Preprint ANL/MCS-OP1099-1003, October
2003. |
|
|
| 1100-1199 |
|
|
|
|
P1100.pdf |
S. Lang and S. Meder, "Security and
Credential Management on the Grid," ClusterWorld 1(2) (Jan.
2004), pp. 8-11. Also Preprint ANL/MCS-P1100-1003, October 2003. |
| |
|
| P1101.pdf |
K. Amin, M. Hategan, G. von
Laszewski, N. J. Zaluzec, "Abstracting the Grid," Preprint ANL/MCS-P1101-1003,
October 2003. |
|
|
| P1103.pdf |
J. Liu, W. Jiang, P. Wyckoff, D. K.
Panda, D. Ashton, D. Buntinas, W. Gropp, B. Toonen, "Design and
Implementation of MPICH2 over InfiniBand with RDMA Support," Preprint
ANL/MCS-P1103-1003, October 2003. |
|
|
| P1104.pdf |
L. Randerson, J. Burruss, E.
Feibush, S. Flanagan, K. Keahey, C. Ludescher, D. C. McCune, Q. Peng, D.
P. Schissel, and M. R. Thompson, "Building Application Services on
the Grid: The National Fusion Collaboratory," Preprint ANL/MCS-P1104-1103,
November 2003. |
| |
|
|
P1105.pdf |
K. Amin, G. von Laszewski, and A.
R. Mikler, "Grid Computing for the Masses: An Overview," Preprint ANL/MCS-P1105-1103,
November 2003. |
| |
|
| P1106.pdf |
T. Özgökmen, P. Fischer, J. Duan,
and T. Iliescu, "Three-Dimensional Turbulent Bottom Density Currents
from a High-Order Nondydrostatic Spectral Element Model," Preprint
ANL/MCS-P1106-1103, Nov. 2003. |
|
|
| P1107.pdf |
P. Moon, G. Sandí, R. Kizilel, and
D. Stevens, "Computational Simulation of Lithium Ion Transport
through Polymer Nanocomposite Membranes," Journal of New Materials
for Electrochmeical Systems 6 (2003), pp. 191-195. Also
Preprint ANL/MCS-P1107-0903, Sept. 2003. |
|
|
| P1108.pdf |
R. Al-Ali, K. Amin, G. von
Laszewski, O. Nana, and D. Walker, "An OGSA-based Quality of Service
Framework," Preprint ANL/MCS-P1108-1103, November 2003. |
|
|
| P1111.pdf |
P. J. Moon, G. Sandí, D. Stevens,
and R. Kizilel, "Computational Modeling of Ionic Transport in
Continuous and Batch Electrodialysis," Preprint ANL/MCS-P1111-1203,
December 2003. |
|
|
| P1112.pdf |
J.-S. Pang and S. Leyffer, "On
the Global Minimization of the Value-at-Risk," Optimization
Methods and Software 19(5) (2004), pp. 611-631.
Also Preprint ANL/MCS-P1112-1203,
December 2003. |
|
|
| P1114.pdf |
A. Zagaris, H. G. Kaper, and T. J.
Kaper, "Fast and Slow Dynamics for the Computational Singular
Perturbation Method," SIAM J. Multiscale Model. Simul. 2
(2004), pp. 613-638. Also Preprint ANL/MCS-P1114-0104, January 2004. |
|
|
| P1115.pdf |
X. Zhang and J. M. Schopf,
"Performance Analysis of the Globus Toolkit Monitoring and Discovery
Service, MDS2," Preprint ANL/MCS-P1115-0104, January 2004. |
|
|
| P1116.pdf |
M. Grimsditch, L. Giovannini, F.
Montoncello,, F. Nizzoli, G. K. Leaf, and H. G. Kaper, "Normal Modes
in Ferromagnetic Nanoparticles: A Dynamical Matrix Approach,"
Preprint ANL/MCS-P1116-0104, January 2004. |
|
|
| P1117.pdf |
A. A. Dunca, "Optimal Design
of Fluid Flow Using Subproblems Reduced by Large Eddy Simulation,"
Preprint ANL/MCS-P1117-1003, Oct. 2003. |
| |
|
| P1118.pdf |
H. Gao, I. R. Judson, T. Uram, T.
L. Disz, M. E. Papka, and R. L. Stevens, "Capability Matching of Data
Streams with Network Services," Preprint ANL/MCS-P1118-0104, January
2004. |
|
|
| P1119.pdf |
W. Jiang, J. Liu, H.-W. Jin, D. K.
Panda, W. Gropp, and R. Thakur, "High Performance MPI-2 Onbe-Sided
Communication over InfiniBand," Preprint ANL/MCS-P1119-0104, January
2004. |
|
|
| P1120.pdf |
P. M. Lyster, J. Guo,
T. Clune, and J. W. Larson, "The Computational Complexity and
Parallel Scalability of Atmospheric Data Assimilation
Algorithms," Journal
of Atmospheric and Oceanic Technology, 21, No. 11 (2004), pp.
1689-1700. Also Preprint ANL/MCS-P1120-0104, January 2004. |
|
|
| P1121.pdf |
W. Yu, D. Buntinas, R. L. Graham,
and D. K. Panda, "Efficient and Scalable Barrier over Quadrics and
Myrinet with a New NIC-based Collective Message Passing Protocol,"
Preprint ANL/MCS-P1121-0204, February 2004. |
|
|
| P1122.pdf |
J. Wu, P. Wyckoff, D. Panda, and R.
Ross, "Unifier: Unifying Cache Management for PVFS over InfiniBand,"
Preprint ANL/MCS-P1122-0204, February 2004. |
| |
|
|
P1123.pdf |
P. M. Dickens and J. W. Larson,
"Classifiers for the Causes of Data Loss Using Packet-Loss Signatures,"
Preprint ANL/MCS-P1123-0204, February 2004. |
| |
|
| P1125.pdf |
A. Ching, A. Choudhary, W.-K. Liao,
R. Ross, W. Gropp, "Evaluating Structured I/O Methods for Parallel
File Systems," IJHPCN 2(2/3/4), (2004), pp. 133-145.
Also Preprint ANL/MCS-P1125-0204, February 2004. |
|
|
| P1126.pdf |
G. von Laszewski, J. Gawor, P.
Plaszczak, M. Hategan, K. Amin, R. Madduri, S. Gose, S. Shankar, "An
Overview of Grid File Transfer Patterns and Their Implementation in the
Java CoG Kit," J. of Neural Parallel and Scientific Computations
12(3), (2004), pp. 329-352. Also Preprint ANL/MCS-P1126-1203, February 2004. |
| |
|
|
P1127.pdf |
B. K. Alunkal, I. Veljkovic, G. von
Laszewski, and K. Amin, "Reputation-Based Grid Resource Selection," Preprint
ANL/MCS-P1127-1203, December 2003. |
| |
|
|
P1128.pdf |
G. von Laszewzki, B. K. Alunkal,
and I. Veljkovic, "Toward Reputable Grids," Preprint ANL/MCS-P1128-1203,
December 2003. |
| |
|
| P1129.pdf |
R. Al-Ali, G. von Laszewski, K.
Amin, M. Hategan, O. Rana, D. Walker, N. Zaluzec, "QoS Support for
High-Performance Scientific Grid Applications," Preprint ANL/MCS-P1129-0204,
February 2004. |
|
|
| P1130.pdf |
W. Allcock, J. Bresnahan, R.
Kettimuthu, J. Link, "The Globus eXtensible Input/Output System (XIO):
A protocol independent IO system for the Grid," Preprint ANL/MCS-P1130-0204,
February 2004. |
|
|
| P1131.pdf |
B. Norris, J. Ray, R. Armstrong, L.
C. McInnes, D. E. Bernholdt, W. R. Elwasif, A. D. Malony, and S. Shende,
"Computational Quality of Service for Scientific Components,"
Preprint ANL/MCS-P1131-0304, March 2004. |
|
|
| P1132.pdf |
V. Welch, I. Foster, C. Kesselman,
O. Mulmo, L. Pearlman, S. Tuecke, J. Gawor, S. Meder, and F. Siebenlist,
"X.509 Proxy Certificates for Dynamic Delegation," Preprint ANL/MCS-P1132-0204,
February 2004. |
|
|
| P1133.pdf |
D. P. Schissel, K. Keahey, T.
Araki, J. R. Burruss, E. Feibush, S. M. Flanagan, T.
W. Fredian, M. J. Greenwald, S. A. Klasky, T. Leggett, K. Li, D. C. McCune,
P. Lane, M. E. Papka, Q. Peng, L. Randerson, A. Sanderson, J. Stillerman, M.
R. Thompson, and G. Wallace, "The National Fusion Collaboratory Project:
Applying Grid Technology for Magnetic Fusion Research," Preprint ANL/MCS-P1133-0304,
March 2004. |
|
|
| P1134.pdf |
T. Munson, "An Averaging
Method for Nash Games with Shared Decision Variables," Preprint ANL/MCS-P1134-0304,
March 2004. |
| |
|
|
P1136.pdf |
T. Munson, "Mesh Shape-Quality
Optimization Using the Inverse Mean-Ratio Metric," Preprint ANL/MCS-P1136-0304,
March 2004. |
| |
|
| P1137.pdf |
A. Kawano, Y. Gao, D. L. Thompson,
A. F. Wagner, and M. Minkoff, "Improving the Accuracy of Interpolated
Potential Energy Surfaces by Using an Analytical Zeroth-Order Potential
Function," Journal of Chemical Physics 120, No. 14
(2004), pp. 6414-6422. Also Preprint ANL/MCS-P1137-0304, March 2004. |
| |
|
|
P1138.pdf |
Y. Zhou, R. Shepard, and M. Minkoff,
"Computing Eigenvalue Bounds for Iterative Subspace Matrix Methods,"
Preprint ANL/MCS-P1138-0304, march 2004. |
| |
|
| P1139.pdf |
K. Keahey, M. E. Papka, Q. Peng, D.
Schissel, G. Abla, T. Araki, J. Burruss, S. Feibush, P. Lane, S. Klasky,
T. Leggett, D. McCune, and L. Randerson, "Grids for Experimental
Science: The Virtual Control Room," Preprint ANL/MCS-P1139-0304,
March 2004. |
|
|
| P1140.pdf |
R. Thakur, R. Rabenseifner, W.
Gropp, "Optimization of Collective Communication Operations in MPICH,"
Preprint ANL/MCS-P1140-0304, March 2004. |
|
|
| P1141.pdf |
K. Keahey, K. Doering, and I.
Foster, "From Sandbox to Playground: Dynamic Virtual Environments in the
Grid," Preprint ANL/MCS-P1141-0304, March 2004. |
|
|
| P1142.pdf |
K. Keahey, T. Araki, and P. Lane,
"Agreement-Based Interactions for Experimental Science,"
Preprint ANL/MCS-P1142-0304, March 2004. |
|
|
| P1143.pdf |
M. Anitescu, "Global
Convergence of an Elastic Mode Approach for a Class of Mathematical
Programs with Complementarity Constraints," Preprint ANL/MCS-P1143-0404,
April 2004. |
|
|
| P1144.pdf |
M. R. Paul, K-H. Chiam, M. C.
Cross, and P. F. Fischer, "Rayleigh-Bénard Convection in
Large-Aspect-Ratio Domains," Preprint ANL/MCS-P1144-0404, April 2004. |
|
|
| P1145.pdf |
U. Naumann, J. Utke, A. Lyons, and
M. Fagan, "Control Flow Reversal for Adjoint Code Generation," Preprint
ANL/MCS-P1145-0404, April 2004. |
|
|
| P1146.pdf |
L. Wos, "Milestones for
Automated Reasoning," International Journal on Artificial
Intelligence Tools 15, No. 1 (2006), pp. 3-19. Also Preprint ANL/MCS-P1146-0404, April 2004. |
|
|
| P1147.pdf |
M. Hereld, R. L. Stevens, W. van
Drongelen, H. C. Lee, "Developing a Petascale Neural
Simulation," Preprint ANL/MCS-P1147-0404, April 2004. |
|
|
| P1148.pdf |
J. P. Kenny, S. J. Benson, Y.
Alexeev, J. Sarich, C. L. Janssen, L. C. McInnes, M. Krishnan, J.
Nieplocha, E. Jurrus, C. Fahlstrom, and T. L. Windus,
"Component-Based Integration of Chemistry and Optimization
Software," J. Comput. Chem. 25, No. 24 (2004), pp. 1717-1725.
Also Preprint ANL/MCS-P1148-0404, April 2004. |
|
|
| P1149.pdf |
N. Desai, R. Bradshaw, and E. Lusk,
"Component-Based Cluster Systems Software Architecture: A Case
Study," Preprint ANL/MCS-P1149-0404, April 2004. |
|
|
| P1150.pdf |
A.-V. Demiguel, M. P. Friedlander,
F. J. Nogales, and S. Scholtes, "An Interior-Point Method for MPECs
Based on Strictly Feasible Relaxations," SIAM J. Optimization
16(2) (2005), pp. 587-609. Title in SIAM journal was changed to
"A Two-Sided Relaxation Scheme for Mathematical Programs with Equilibrium
Constraints." Also Preprint ANL/MCS-P1150-0404,
April 2004. |
| |
|
|
P1151.pdf |
N. T. Karonis, M. E. Papka, J.
Binns, J. Bresnahan, and J. M. Link, "Effective Use of Dedicated Wide-Area
Networks for High-Performance Distributed Computing," Preprint ANL/MCS-P1151-0404,
April 2004. |
| |
|
| P1152.pdf |
C. H. Bischof, P. D. Hovland, and
B. Norris, "On the Implementation of Automatic Differentiation
Tools," Preprint ANL/MCS-P1152-0404, April 2004. |
| |
|
|
P1153.pdf |
S. L. Lee and P. D. Hovland,
"Derivative Techniques for Forward Sensitivity Analysis in Time-Dependent
Problems," Preprint ANL/MCS-P1153-0404, April 2004. |
| |
|
|
P1154.pdf |
W. Gropp and E. Lusk, "Fault
Tolerance in MPI Programs," Preprint ANL/MCS-P1154-0404, April 2004. |
| |
|
| P1155.pdf |
E. D. Dolan, J. J. Moré, and T. S.
Munson, "Optimality Measures for Performance Profiles," SIAM
J. Optimization 16(3) (2006), pp. 891-909. Also Preprint ANL/MCS-P1155-0504, May 2004. |
|
|
| P1156.pdf |
G. von Laszewski, G. W. Pieper, and
P. Wagstrom, "Gestalt of the Grid," in Performance Evaluation
and Characterization of Parallel and Distributed Computing Tools, eds.
S. Hariri and M. Parashar, Chapter 6, John Wiley & Sons, Inc. (to
appear). Also Preprint ANL/MCS-P1156-0504, April 2004. |
|
|
| P1157.pdf |
J. Peng, M. Anitescu, and S. Akella,
"Optimal Control of Multiple Robot Systems with Friction using MPCC,"
Preprint ANL/MCS-P1157-0404, April 2004. |
|
|
| P1158.pdf |
R. Thakur, W. Gropp, and B. Toonen,
"Minimizing Synchronization Overhead in the Implementation of MPI
One-Sided Communication," Preprint ANL/MCS-P1158-0504, May 2004. |
|
|
| P1159.pdf |
L. F. Diachin, P. Knupp, T. Munson,
and S. Shontz, "A Comparison of Inexact Newton and Coordinate Descent
Mesh Optimization Techniques," Preprint ANL/MCS-P1159-0504, May 2004. |
|
|
| P1160.pdf |
N. Desai, R. Bradshaw, A. Lusk, and
E. Lusk, "MPI Cluster System Software," in Recent Advances in
Parallel Virtual Machine and Message Passing Interface, Proc. 2004
EuroPVM/MPI, Budapest, Sept. 14-15, 2004 (to appear). Also Preprint
ANL/MCS-P1160-0504, May 2004. |
|
|
| P1161.pdf |
M. Anitescu,
"Optimization-Based Simulation of Nonsmooth Rigid Multibody
Dynamics," Preprint ANL/MCS-P1161-0504, May 2004. |
|
|
| P1162.pdf |
F. A. Potra, M. Anitescu, B. Gavrea,
and J. Trinkle, "A Linearly Implicit Trapezoidal Method for
Integrating Stiff Multibody Dynamics with Contact, Joints, and
Friction," Preprint ANL/MCS-P1162-0504, May 2004. |
| |
|
|
P1163.pdf |
U. Naumann, J. Utke, and A. Lyons,
"Control Flow Reversal for Adjoint Code Generation," Preprint ANL/MCS-P1163-0504,
May 2004. |
| |
|
| P1164.pdf |
W. Jiang, J. Liu, H.-W. Jin, D. K.
Panda, D. Buntinas, R. Thakur, and W. Gropp, "Efficient
Implementation of MPI-2 Passive One-Sided Communication on InfiniBand
Clusters," Preprint ANL/MCS-P1164-0504, May 2004. |
|
|
| P1165.pdf |
T. Bae, A. K. Banger, A. Wallace,
E. M. Glass, F. Aslund, O. Schneewind, D. M. Missiakas,
"Staphylococcus Aureus Virulence Genes Identified by Bursa Aurealis
Mutagenesis and Nematode Killing," Proc. Natl. Acad. Sci. U.S.A., 101(33),
12312-317, August 17, 2004. Also Preprint ANL/MCS-P1165-0604, June
2004. |
| |
|
|
P1166.pdf |
W. E. Allcock, I. Foster, and R.
Madduri, "Reliable Data Transport: A Critical Service for the Grid,"
Preprint ANL/MCS-P1166-0604, June 2004. |
| |
|
|
P1167.pdf |
M. M. Strout and P. D. Hovland,
"Metric and Models for Reordering Transformations," Preprint ANL/MCS-P1167-0604,
June 2004. |
| |
|
| P1168.pdf |
R. Kettimuthu and W. Allcock,
"Improved Selective Acknowledgment Scheme for TCP," Preprint ANL/MCS-P1168-0604,
June 2004. |
| |
|
|
P1169.pdf |
R. Overbeek, T. Disz, and R.
Stevens, "A Peer-to-Peer Environment for Annotation of Genomes: The SEED,"
Preprint ANL/MCS-P1169-0604, June 2004. |
| |
|
| P1170.pdf |
W. van Drongelen, H. C. Lee, M.
Hereld, D. Jones, M. Cohoon, F. Elsen, M. E. Papka, R. L. Stevens,
"Simulation of Neocortical Epileptiform Activity Using Parallel
Computing," Neurocomputing 58-60 (2004), pp.
1203-1209. Also Preprint ANL/MCS-P1170-0604, June 2004. |
| |
|
|
P1171.pdf |
W. van Drongelen, H. C. Lee, M.
Hereld, Z. Chen, F. P. Elsen, and R. L. Stevens, "Emergent Epileptiform
Activity in Neural Networks with Weak Excitatory Synapses," IEEE
Trans. Neural Syst. Rehab. Eng. 13(2) (2005), pp. 236-241.
Also Preprint ANL/MCS-P1171-0604,
June 2004. |
| |
|
| P1172.pdf |
W. van Drongelen, H. C. Lee, H.
Koch, F. Elsen, M. S. Carroll, M. Hereld, R. L. Stevens, "Interaction
between Cellular Voltage-Sensitive Conductance and Network Parameters in a
Model of the Neocortex Can Generate Epileptiform Bursting," Preprint
ANL/MCS-P1172-0604, June 2004. |
|
|
| P1173.pdf |
C. E. Frouzakis, A. G. Tomboulides,
P. Papas, P. F. Fischer, R. M. Rais, P. A. Monkewitz, and K. Boulouchos,
"Three-Dimensional Numerical Simulations of Cellular Jet Diffusion
Flames," presented at Combustion Institute, Chicago, IL, June 25-30,
2004. Also Preprint ANL/MCS-P1173-0604, June 2004. |
|
|
| P1174.pdf |
W. Ligon and R. Ross,
"Parallel I/O and the Parallel Virtual File System," in Beowulf
Cluster Computing with Linux, second edition, edited by W. Gropp, E. Lusk,
and T. Sterling, Cambridge, MA (2003), pp. 493-534. Also Preprint
ANL/MCS-P1174-0504, May 2004. |
|
|
| P1175.pdf |
S. J. Benson, L. McInnes, J. J.
Moré, and J. Sarich, "Scalable Algorithms in Optimization:
Computational Experiments," Preprint ANL/MCS-P1175-0604, June 2004. |
|
|
| P1176.pdf |
J. Lee, X. Ma, R. Ross, R. Thakur,
M. Winslett, "RFS: Efficient and Flexible Remote File Access for MPI-IO,"
Preprint ANL/MCS-P1176-0604, June 2004. |
|
|
| P1177.pdf |
W. Yu, D. Buntinas, and D. K.
Panda, "Scalable and High Performance NIC-Based All-to-All Broadcast
Over Myrinet/GM," Preprint ANL/MCS-P1177-0604, June 2004. |
| |
|
|
P1178.pdf |
W. Gropp, R. Ross, and N. Miller,
"Providing Efficient I/O Redundancy in MPI Environments," Preprint ANL/MCS-P1178-0604,
June 2004. |
| |
|
|
P1179.pdf |
L. C. McInnes, B. A. Allan, R.
Armstrong, S. J. Benson, D. E. Bernholdt, T. L. Dahlgren, L. F. Diachin, M.
Krishnan, J. A. Kohl, J. W. Larson, S. Lefantzi, J. Nieplocha, B. Norris, S.
G. Parker, J. Ray, and S. Zhou, "Parallel PDE-Based Simulations Using the
Common Component Architecture," Preprint ANL/MCS-P1179-0704, July 2004. |
| |
|
|
P1180.pdf |
H. Zhang, K. Keahey, and W. Allcock,
"Providing Data Transfer with QoS as Agreement-Based Service," Preprint ANL/MCS-P1180-0704,
July 2004. |
| |
|
| P1182.pdf |
R. Latham, R. Ross, and R. Thakur,
"The Impact of File Systems on MPI-IO Scalability," Preprint ANL/MCS-P1182-0604,
June 2004. |
|
|
| P1183.pdf |
G. Almási, C. Archer, J. G.
Castańos, J. Gunnels, C. C. Erway, P. Heidelberger, X. Martorell, J. E.
Moreira, K. Pinnow, J. Ratterman, B. Steinmacher-burow, W. Gropp, and B.
Toonen, "The Design and Implementation of Message Passing Services
for the BlueGene/L Supercomputer," Preprint ANL/MCS-P1183-0604, June
2004. |
|
|
| P1185.pdf |
T. Araki, "Autonomic WWW
Server Management with Distributed Resources," Preprint ANL/MCS-P1185-0704,
July 2004. |
|
|
| P1186.pdf |
J. N. Lyness, "A Prototype
Four-Dimensional Galerkin-Type Integral," RIMS (Kyoto Univ.)
41 (2005), pp. 843-851. Also Preprint ANL/MCS-P1186-0604,
June 2004. |
|
|
| P1187.pdf |
G. G. Maisuradze, A. Kawano, D. L.
Thompson, A. F. Wagner, and M. Minkoff, "Interpolating Moving
Least-Squares Methods for Fitting Potential Energy Surfaces: Analysis of
an Application to a Six-Dimensional System," Preprint ANL/MCS-P1187-0704,
July 2004. |
|
|
| P1188.pdf |
Y. Guo, A. Kawano, D. L. Thompson,
A. F. Wagner, and M. Minkoff, "Interpolating Moving Least-Squares
Methods for Fitting Potential Energy Surfaces: Applications to Classical
Dynamics Calculations," Preprint ANL/MCS-P1188-0704, July 2004. |
|
|
|
P1190.pdf |
B. Addis and S. Leyffer, "A
Trust-Region Algorithm for Global Optimization," Preprint ANL/MCS-P1190-0804,
August 2004. |
| |
|
| P1191.pdf |
Y. Chen, B. F. Hobbs, S. Leyffer,
and T. S. Munson, "Leader-Follower Equilibria for Electric Power and
NOx Allowances Markets," Preprint ANL/MCS-P1191-0804,
August 2004. |
|
|
| P1192.pdf |
R. Padmanabhan, W. McCune, and R.
Veroff, "Levi's Commutator Theorems for Cancellative Semigroups,"
Semigroup Forum 71 (2005), pp. 152-175. Also Preprint
ANL/MCS-P1192-0804, August 2004. |
|
|
| P1193.pdf |
W. D. Gropp, "Issues in
Accurate and Reliable Use of Parallel Computing in Numerical
Programs," Preprint ANL/MCS-P1193-0804, August 2004. |
|
|
| P1194.pdf |
U. Naumann and J. Utke,
"Optimality-Preserving Elimination of Linearities in Jacobian
Accumulation," Preprint ANL/MCS-P1194-0904, September 2004. |
|
|
|
P1195.pdf |
Y. Zhao, M. Wilde, I. Foster, J.
Voeckler, T. Joran, E. Quigg, and J. Dobson, "Grid Middleware Services for
Virtual Data Discovery, Composition, and Integration," Preprint ANL/MCS-P1195-0904,
September 2004. |
|
|
| P1196.pdf |
J. Utke, "Flattening Basic
Blocks," Preprint ANL/MCS-P1196-0904, September 2004. |
|
|
| P1197.pdf |
G.-X. Yu, E. Marland, N. T. Karonis,
and N. Maltsev, "A Knowledge-Based Voting Algorithm for Automated
Protein Fucntional Annotation," Preprint ANL/MCS-P1197-0904,
September 2004. |
|
|
| P1198.pdf |
N. Maltsev, E. M. Glass, G.
Ovchinnikova, and Z. Gu, "Molecular Mechanisms Involved in Robustness
of Yeast Central Metabolism Against Null Mutations," Preprint ANL/MCS-P1198-0904,
September 2004. |
|
|
|
P1199.pdf |
G.-X. Yu, E. M. Glass, N. T.
Karonis, N. Maltsev, "A Knowledge-Based Voting Algorithm for Automated
Protein Functional Annotation," Preprint ANL/MCS-P1199-0904, September 2004. |
|
|
| 1200-1299 |
|
|
|
| P1200.pdf |
S. Son, B. Allcock, and M. Livny,
"CODO: Firewall Traversal by Cooperative On-Demand Opening,"
Preprint ANL/MCS-P1200-1004, October 2004. |
|
|
| P1201.pdf |
K. Keahey, M. E. Papka, Q. Peng, D.
Schissel, G. Abla, T. Araki, J. Burruss, E. Feibush, P. Lane, S. Klasky,
T. Leggett, D. McCune, L. Randerson, "Grid Support for Collaborative
Control Room in Fusion Science," Preprint ANL/MCS-P1201-1004, October
2004. |
|
|
| P1202.pdf |
M. S. Min, T. W. Lee, P. F.
Fischer, and S. K. Gray, "Fourier Spectral Simulations and Gegenbauer
Reconstructions for Electromagnetic Waves in the Presence of a Metal
Nanoparticle," Preprint ANL/MCS-P1202-1004, October 2004. |
|
|
| P1204.pdf |
K. Amin, G. von Laszewski, A. R.
Mikler, "Toward an Architecture for Ad Hoc Grids," Preprint ANL/MCS-P1204-1004,
October 2004. |
|
|
| P1205.pdf |
A. Majumder and R. Stevens,
"Perceptual Photometric Seamlessness in Projection-Based Tiled
Displays," To appear in ACM Transactions on Graphics.
Also Preprint ANL/MCS-P1205-1104, November 2004. |
|
|
| P1206.pdf |
P. H. Beckman, "Building the
TeraGrid," Preprint ANL/MCS-P1206-1104, November 2004. |
|
|
|
P1207.pdf |
A. Zagaris, H. G. Kaper, and T. J.
Kaper, "Two Perspectives on Reduction of Ordinary Differential Equations,"
Preprint ANL/MCS-P1207-1104, November 2004. |
|
|
| P1208.pdf |
J. Larson, R. Jacob, and E. Ong,
"The Model Coupling Toolkit: A New Fortran90 Toolkit for Building
Multiphysics Parallel Coupled Models," Inter. J. High Perform.
Comput. Appl. 19, no. 3 (2005), pp. 277-292. Also Preprint ANL/MCS-P1208-1204,
December 2004. |
|
|
| P1209.pdf |
R. Kettimuthu, V. Subramani, S.
Srinivasan, T. Gopalsamy, D. K. Panda, and P. Sadayappan, "Selective
Preemption Strategies for Parallel Job Scheduling," Preprint ANL/MCS-P1209-1204,
December 2004. |
|
|
| P1210.pdf |
Y. K. Kuan, P. F. Fischer, F. Loth,
"Surface Reconstruction of In Vivo Geometry Base on Medical
Images using Multilevel Radial Basis Functions," Preprint ANL/MCS-P1210-0904,
September 2004. |
|
|
| P1211.pdf |
S. Leyffer, G. López-Calva, and J.
Nocedal, "Interior Methods for Mathematical Programs with
Complementarity Constraints," Preprint ANL/MCS-P1211-1204, December
2004. |
|
|
|
P1212.pdf |
P. F. Fischer, G. K. Leaf, and J.
M. Restrepo, "Influence of Wall Proximity on the Lift and Drag of a Particle
in an Oswcillatory Flow," Preprint ANL/MCS-P1212-1204, December 2004. |
|
|
| P1213.pdf |
P. F. Fischer and C. P. Tzanos,
"Filtered Simulations of Turbulence in a Reactor Rod Bundle
Flow," Preprint ANL/MCS-P1213-0105, January 2005. |
|
|
| P1216.pdf |
G. von Laszewski and M. Sosonkin,
"A Grid Certificate Authority for Community and Ad-hoc Grids,"
Preprint ANL/MCS-P1216-0105, January 2005. |
|
|
| P1218.pdf |
W. McCune, R. Padmanabhan, M. A.
Rose, and R. Veroff, "Automated Discovery of Single Axioms for
Ortholattices," Algebra Universalis 52 (2004),
pp. 541-549. Also Preprint ANL/MCS-P1218-0105, January 2005. |
|
|
| P1219.pdf |
N. Desai, A. Lusk, R. Bradshaw, and
E. Lusk, "MPISH: A Parallel Shell for MPI Programs," Preprint
ANL/CMS-P1219-0105, January 2005. |
|
|
|
P1220.pdf |
M. M. Strout, B. Kreaseck, and P.
Hovland, "Data-Flow Analysis for MPI Programs," Preprint ANL/MCS-P1220-0105,
January 2005. |
|
|
| P1221.pdf |
B. Norris and I. Veljkovic,
"Performance Monitoring and Analysis Components in Adaptive PDE-Based
Simulations," Preprint ANL/MCS-P1221-0105, January 2005. |
|
|
| P1222.pdf |
A. P. Craig, R. L. Jacob, B.
Kauffman, T. Bettge, J. Larson, E. Ong, C. Ding, Y. He, "Cp16: The
New Extensible, High-Performance Parallel Coupler for the Community
Climate System Model," Preprint ANL/MCS-P1222-0205, February 2005. |
|
|
| P1223.pdf |
A. Zagaris, H. G. Kaper, T. J.
Kaper, "Two Perspectives on Reduction of Ordinary Differential
Equations," Preprint ANL/MCS-P1223-0205, February 2005. |
|
|
|
P1224.pdf |
E. Lusk, N. Desai, R. Bradshaw, A.
Lusk, R. Butler, "An Interoperability Approach to System Software, Tools,
and Libraries for Clusters," Preprint ANL/MCS-P1224-0205, February 2005. |
|
|
| P1225.pdf |
R. Jacob, J. Larson, and E. Ong,
"MxN Communication and Parallel Interpolation in CCSM3 Using the
Model Coupling Toolkit," Preprint ANL/MCS-P1225-0205, February 2005. |
|
|
| P1226.pdf |
U. Naumann and J. Utke,
"Source Templates for the Automatic Generation of Adjoint Code
through Static Call Graph Reversal," Preprint ANL/MCS-P1226-0205,
February 2005. |
|
|
| P1227.pdf |
D. Sulakhe, A. Rodriguez, M.
D'Souza, M. Wilde, V. Nefedova, I. Foster, N. Maltsev, "GNARE: An
Environment for Grid-Based High-Throughput Genome Analysis," Proc.
CCGRID05, IEEE, pp. 455-462, 2005. Also Preprint ANL/MCS-P1227-0205, February 2005. |
|
|
|
P1228.pdf |
H. Lee, M. Hereld, R. Stevens, and
W. van Drongelen, "Epileptiform Activity Patterns in Coupled Neuronal
Networks," Preprint ANL/MCS-P1224-0205, February 2005. |
|
|
|
P1229.pdf |
M. Hereld, R. Stevens, J. Teller,
W. van Drongelen, H. Lee, "Large Neural Simulations on Large Parallel
Computers," Preprint ANL/MCS-P1229-0205, February 2005. |
|
|
|
P1230.pdf |
J. Utke, U. Naumann, M. Fagan, N.
Tallent, M. Strout, P. Heimbach, C. Hill, and C. Wunsch, "OpenAD/F: A
Modular, Open-Source Tool for Automatic Differentiation of Fortran Codes,"
Preprint ANL/MCS-P1230-0205, February 2005. |
|
|
|
P1231.pdf |
K. Keahey, I. Foster, T. Freeman,
X. Zhang, and D. Galron, "Virtual Workspaces in the Grid," Preprint ANL/MCS-P1231-0205,
February 2005. |
|
|
| P1232.pdf |
R. Thakur, W. Gropp, B. Toonen,
"Optimizing the Synchronization Operations in MPI One-Sided
Communication," Preprint ANL/MCS-P1232-0205, February 2005. |
|
|
|
P1233.pdf |
M. Min, "Discontinuous Galerkin
Method Based on Quadrilateral Mesh for Maxwell's Equations," Preprint ANL/MCS-P1233-0205,
February 2005. |
|
|
|
P1234.pdf |
L. Yang, J. M. Schopf, I. Foster,
"Improving Parallel Data Transfer Times Using Predicted Variances in Shared
Networks," Preprint ANL/MCS-P1234-0305, March 2005. |
|
|
| P1235.pdf |
R. Ross, R. Latham, W. Gropp, R.
Thakur, B. Toonen, "Implementing MPI-IO Atomic Mode Without File
System Support," Preprint ANL/MCS-P1235-0305, March 2005. |
|
|
| P1236.pdf |
H. G. Kaper and S. Tipei, "DISSCO:
A Unified Approach to Sound Synthesis and Composition," Preprint ANL/MCS-P1236-0305,
March 2005. |
|
|
| P1237.pdf |
M. Hereld and R. L. Stevens,
"Pixel-Aligned Warping for Multi-Projector Tiled Displays,"
Preprint ANL/MCS-P1237-0305, March 2005. |
|
|
|
P1238.pdf |
T. Disz, M. Kubal, R. Olson, R.
Overbeek, and R. Stevens, "Challenges in Large Scale Distributed Computing:
Bioinformatics," Preprint ANL/MCS-P1238-0305, March 2005. |
|
|
| P1239.pdf |
L. F. Diachin, P. Knupp, T. Munson,
S. Shontz, "A Comparison of Two Optimization Methods for Mesh Quality
Improvement," Preprint ANL/MCS-P1239-0305, March 2005. |
|
|
|
P1240.pdf |
L. Yang, J. M. Schopf, I. Foster,
"Improving Parallel Data Transfer Times Using Predicted Variances in Shared
Networks," Preprint ANL/MCS-P1240-0305, March 2005. |
|
|
|
P1241.pdf |
J. N. Lyness, "Extrapolation
Expansions for Hanging-Chad-Type Galerkin Integrals with Plane Triangular
Elements," Preprint ANL/MCS-P1241-0305, March 2005. |
|
|
| P1242.pdf |
M. Anitescu, P. Tseng, S. Wright,
"Elastic-Mode Algorithms for Mathematical Programs with Equilibrium
Constraints: Global Convergence and Stationarity Properties,"
Preprint ANL/MCS-P1242-0405, April 2005. |
|
|
| P1243.pdf |
S. Leyffer and T. Munson,
"Solving Multi-Leader-Follower Games," Preprint ANL/MCS-P1243-0405,
April 2005. |
|
|
|
P1244.pdf |
J. N. Lyness and T. Sorevik,
"Five-Dimensional K-Optimal Lattice Rules," Preprint ANL/MCS-P1244-0105,
January 2005. |
|
|
|
P1245.pdf |
D. Rosenberg, A. Fournier, P.
Fischer, and N. Pouquet, "Geophysical-Astrophysical Spectral-Element
Adaptive Refinement (GASpAR): Object-oriented h-adaptive code for
geophysical fluid dynamics simulation," Preprint ANL/MCS-P1245-0405, April
2005. |
|
|
|
P1247.pdf |
M. Anitescu, "Mathematical Programs
with Equilibrium Constraints and Applications to Control," Preprint ANL/MCS-P1247-0405,
April 2005. |
|
|
|
P1248.pdf |
J. M. Schopf, M. D'Arcy, N. Miller,
L. Pearlman, I. Foster, C. Kesselman, "Monitoring and Discovery in a Web
Services Framework: Functionality and Performance of the Globus Toolkit's
MDS4," Preprint ANL/MCS-P1248-0405, April 2005. |
|
|
|
P1249.pdf |
I. Foster, "Service-Oriented
Science," Preprint ANL/MCS-P1249-0405, April 2005. |
|
|
|
P1250.pdf |
K. Amin, G. von Laszewski, M.
Hategan, R. Al-Ali, O. Rana, and D. Walker, "An Abstraction Model for a Grid
Execution Framework," Preprint ANL/MCS-P1250-0405, April 2005. |
|
|
|
P1251.pdf |
M. Anitescu and W. J. Layton,
"Sensitivities in Large Eddy Simulation and Improved Estimates of Turbulent
Flow Functionals," SIAM J. Sci. Comput. 29, no. 4 (2007),
pp. 1650-1667. Also Preprint ANL/MCS-P1251-0505, May 2005. |
|
|
|
P1253.pdf |
G. von Laszewski, "The Grid-Idea
and Its Evolution," Preprint ANL/MCS-P1253-0505, May 2005. |
|
|
|
P1254.pdf |
C. S. Verma, P. F. Fischer, S. E.
Lee, and F. Loth, "An All-Hex Meshing Strategy for Bifurcation Geometries in
Vascular Flow Simulation," Preprint ANL/MCS-P1254-0505, May 2005. |
|
|
|
P1255.pdf |
M. M. Strout, J. Mellor-Drummey,
and Paul Hovland, "Representation-Independent Program Analysis," Preprint
ANL/MCS-P1255-0605, June 2005. |
|
|
|
P1256.pdf |
G. von Laszewski, D. Kodeboyina, "A
Repository Service for Grid Workflow Components," Preprint ANL/MCS-P1256-0605,
June 2005. |
|
|
|
P1257.pdf |
